Structure

    redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
219.97 0.3

Annotations:

C a1D-GalNAc,p/#ccleavage--6?1HexNAc,p$MONO,Und,-H,0,redEnd
221.99 2.0

Annotations:

Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
234.19 0.4
239.05 0.3
249.31 0.4
256.82 0.2
262.03 541.7

Annotations:

^{0,4}A_{GalNAc} a1D-GalNAc,p/#acleavage_0_4--6?1HexNAc,p$MONO,Und,-H,0,redEnd
269.97 0.2
275.03 0.3
276.07 0.3
281.0 0.4
303.94 0.6
304.16 0.3
311.04 0.5
316.78 1.4
317.1 2.7
328.02 2.2
329.0 1.5
329.78 0.3
330.26 1.2
345.1 3.4
346.08 2.7

Annotations:

BZ ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
346.42 0.2
346.8 0.7
363.97 0.3

Annotations:

BY ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
364.87 0.3
365.14 0.4
369.08 4.2
371.05 0.2
384.03 0.3
387.22 6.3

Annotations:

BZ ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
389.02 3.9

Annotations:

ZZ redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
389.27 3.1
399.14 0.4
403.9 1.0
405.02 51.8

Annotations:

BY ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
407.05 1.9

Annotations:

YZ redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
407.32 0.4
424.99 0.2

Annotations:

YY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
425.37 0.2
431.16 0.6
431.44 0.3
437.12 0.9
459.58 0.3
460.86 0.3
461.44 0.3
477.98 0.3
478.53 0.2
490.02 0.2
497.0 0.3
497.29 0.4
501.8 0.2
502.17 0.3
508.07 0.3
509.24 1.0
514.1 0.5
520.84 0.3
526.25 0.3
527.2 8.8
532.04 0.3
532.27 0.4
538.22 0.2
548.93 0.2
549.49 0.2
550.2 5.3
567.25 13.9

Annotations:

B ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
568.19 12.7
569.13 12.8

Annotations:

Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
573.97 0.2
587.23 4.6

Annotations:

Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
592.07 0.7
592.56 0.2
593.06 0.4
610.21 3.7

Annotations:

Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
611.29 0.4
628.1 2.9

Annotations:

Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
628.37 1.5
630.04 0.5
640.32 4.8
651.98 0.2
653.25 0.3
670.01 1.8
670.33 1.9
681.71 1.1
682.34 12.5
686.92 0.7
688.25 3.8
694.1 0.3
700.06 0.9
700.27 0.7
712.05 1.0
712.36 0.6
730.21 368.1
731.14 1.2
731.43 0.6
748.26 10.3
754.37 0.2
760.35 0.2
801.59 0.2
1001.46 0.5

There are 8 similar spectra:

Id Structure Score

5717

0.99

7406

0.98

7435

0.98

5431

0.89

7171

0.76

4852

0.54

5718

0.54

3756

0.51

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 789.32
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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