Structure

    redEnd--??1D-GalNAc,p--3b1D-Gal,p--??1HexNAc,p--3a2D-NeuAc,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
246.2 0.6
246.77 0.0
247.29 0.0
271.85 0.8
272.12 0.5
272.38 0.7
272.94 0.0
273.46 0.0
276.06 0.8
276.61 0.0
277.15 0.0
290.13 78.9

Annotations:

B ?1HexNAc,p/#bcleavage--3a2D-NeuAc,p$MONO,Und,-H,0,redEnd
290.83 1.0
291.19 2.1
291.82 0.0
292.33 0.0
364.23 2.5

Annotations:

BY ?1D-GalNAc,p/#bcleavage--3b1D-Gal,p--??1HexNAc,p--3a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--3b1D-Gal,p--??1HexNAc,p--3a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
364.82 0.0
365.36 0.0
383.69 0.7
384.33 7.5

Annotations:

Y redEnd--??1D-GalNAc,p--3b1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
385.31 0.6
385.88 0.0
437.17 0.8
437.72 0.0
438.27 0.0
449.24 0.6
450.02 0.9
450.59 0.0
451.11 0.0
476.51 1.0
477.08 0.4
477.63 0.0
479.17 7.8
479.85 0.0
480.23 0.9
480.78 0.0
481.33 0.0
493.2 6.8

Annotations:

B b1D-Gal,p/#bcleavage--??1HexNAc,p--3a2D-NeuAc,p$MONO,Und,-H,0,redEnd
494.05 2.1
494.61 0.0
495.17 0.8
495.72 0.0
496.28 0.0
521.23 0.7
521.78 0.0
527.3 3.6

Annotations:

^{2,4}X_{HexNAc} redEnd--??1D-GalNAc,p--3b1D-Gal,p--??1HexNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
528.26 0.5
528.81 0.0
545.25 2.9
545.8 0.0
546.36 0.0
569.18 0.5

Annotations:

Z redEnd--??1D-GalNAc,p--3b1D-Gal,p--??1HexNAc,p--3a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
569.73 0.0
587.25 224.5

Annotations:

Y redEnd--??1D-GalNAc,p--3b1D-Gal,p--??1HexNAc,p--3a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
588.21 33.2
589.07 0.0
589.43 0.6
589.98 0.0
590.53 0.0
657.42 1.2
657.91 0.9
658.34 0.5
658.89 0.0
676.04 0.5
676.6 0.0
677.12 0.0
700.53 0.7
701.11 0.0
701.63 0.0
708.75 1.1
709.3 0.0
709.86 0.0
737.54 0.6
738.11 0.0
738.63 0.0
772.87 0.4
773.44 0.0
799.15 0.6
799.7 0.0
815.35 0.5
815.87 0.0
816.48 0.6
817.03 0.0
818.5 1.3
819.05 0.0
819.61 0.0
832.99 0.5
833.54 0.0
835.76 0.7
836.56 0.5
837.12 0.0
837.49 1.1
838.04 0.0
838.6 0.0
841.15 0.4
841.7 0.0
846.52 0.5
847.08 0.0
847.61 0.0

There are 17 similar spectra:

Id Structure Score

6733

0.99

6805

0.97

7218

0.86

6734

0.72

6807

0.71

3500

0.69

5437

0.64

5786

0.63

3974

0.61

7149

0.60

4860

0.58

4239

0.57

5231

0.57

6806

0.56

4858

0.56

4240

0.52

5232

0.52

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 877.33
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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