Structure

    redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
246.16 1.0
271.96 1.5
290.12 270.6

Annotations:

B ?1D-GalNAc,p/#bcleavage--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
291.28 9.7
292.24 2.0

Annotations:

Y^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
308.2 13.3

Annotations:

C ?1D-GalNAc,p/#ccleavage--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
319.3 1.0
364.27 3.3

Annotations:

B ?1D-GalNAc,p/#bcleavage--3b1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd
366.17 4.0

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p/#ycleavage)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p/#zcleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
366.52 1.0
384.23 13.0

Annotations:

YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p/#ycleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
384.97 3.9
391.37 1.5
392.39 2.0
406.19 1.6
411.86 1.2
417.26 1.3
435.18 3.0
436.34 1.4

Annotations:

Z^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p/#zcleavage)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
452.35 1.1
454.12 2.6

Annotations:

Y^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p/#ycleavage)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
477.02 15.5
477.29 10.6
479.46 1.8
480.31 2.3
493.07 3.3
495.3 21.1

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
496.44 2.9
509.21 1.2
513.3 10.7

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
514.09 5.1
514.33 2.3
526.8 1.3
527.32 5.4

Annotations:

^{0,4}X_{GalNAc} redEnd--??1D-GalNAc,p/#xcleavage_0_4--3b1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd
545.05 2.1
551.22 2.4
554.97 1.1
569.25 19.5

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
570.48 3.8
571.47 1.1
587.25 211.9

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
588.29 45.0
597.33 5.2
597.7 1.0
613.23 3.3
613.53 1.1
615.09 10.9
615.4 6.9
616.35 4.8
616.57 1.6
629.25 5.0
630.34 1.0
631.27 3.0
639.2 9.6
639.42 2.8
640.4 4.0
656.09 1.7
657.31 94.0

Annotations:

^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
658.12 8.4
658.42 14.2
659.29 1.7
675.33 65.1

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
676.22 24.4
676.51 12.2
677.17 1.6
680.09 4.4
680.31 1.3
700.76 1.5
710.29 3.1
722.02 1.2
739.2 1.2
740.5 5.7
741.31 1.6
746.94 1.5
757.94 1.0
758.48 4.4
770.39 6.9
771.34 1.6
774.09 1.3
782.86 1.9
795.21 1.6
800.24 33.8
800.52 23.4
801.44 17.3
814.94 1.5
816.4 2.3
817.04 1.6
817.37 4.7
818.35 350.1
819.34 127.6
832.36 1.7
832.95 1.5
834.37 1.0
835.34 1.0
836.41 3.9
840.8 2.1
842.32 13.3
843.33 2.3
846.78 1.0
1390.46 1.1

There are 34 similar spectra:

Id Structure Score

6806

0.98

5435

0.96

7148

0.92

5722

0.88

5721

0.88

5785

0.87

7149

0.86

5436

0.85

4808

0.84

7409

0.81

7438

0.81

4859

0.80

5570

0.72

5520

0.72

7408

0.70

7437

0.70

6805

0.63

6807

0.63

6734

0.62

5437

0.61

7218

0.60

3500

0.60

4240

0.60

5232

0.60

4860

0.59

4239

0.58

5231

0.58

4857

0.56

5786

0.55

6733

0.54

3974

0.53

4241

0.53

5233

0.53

5571

0.53

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 877.33
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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