Structure

    redEnd--??1D-GalNAc,p--3b1D-Gal,p--??1HexNAc,p(--??1D-Gal,p)--??1L-Fuc,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
282.01 0.2
303.97 0.3
316.31 0.7
316.86 0.0
323.69 0.4
324.15 1.8
324.75 0.0
329.13 0.7
329.68 0.0
330.28 0.2

Annotations:

BZ b1D-Gal,p/#bcleavage--??1HexNAc,p(--??1D-Gal,p/#zcleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
346.01 0.4

Annotations:

BZ b1D-Gal,p/#bcleavage--??1HexNAc,p(--??1D-Gal,p)--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
346.56 0.0
353.05 0.2
357.38 0.5
363.97 0.2

Annotations:

BY b1D-Gal,p/#bcleavage--??1HexNAc,p(--??1D-Gal,p)--??1L-Fuc,p/#ycleavage$MONO,Und,-H,0,redEnd CZ b1D-Gal,p/#ccleavage--??1HexNAc,p(--??1D-Gal,p)--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
366.23 0.5

Annotations:

CY b1D-Gal,p/#ccleavage--??1HexNAc,p(--??1D-Gal,p/#ycleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p--3b1D-Gal,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
366.76 0.0
371.19 0.7
371.77 0.0
384.11 53.9

Annotations:

Y redEnd--??1D-GalNAc,p--3b1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
384.89 1.3
385.3 2.1
385.89 0.0
389.08 0.6
408.88 0.2
413.27 0.3
418.17 0.3
456.01 0.4
461.09 4.0
461.73 0.0
462.13 0.2
479.21 8.9
479.97 0.0
489.39 0.5
489.94 0.0
492.07 0.4

Annotations:

BZ ?1D-GalNAc,p/#bcleavage--3b1D-Gal,p--??1HexNAc,p(--??1D-Gal,p/#zcleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
505.04 0.4
507.0 0.5
508.74 0.6
509.18 2.8
510.01 5.6

Annotations:

CZ ?1D-GalNAc,p/#ccleavage--3b1D-Gal,p--??1HexNAc,p(--??1D-Gal,p/#zcleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd BY ?1D-GalNAc,p/#bcleavage--3b1D-Gal,p--??1HexNAc,p(--??1D-Gal,p/#ycleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd B b1D-Gal,p/#bcleavage--??1HexNAc,p(--??1D-Gal,p)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
510.32 3.5
511.01 0.9
511.28 0.3
520.0 0.2
520.62 0.2
521.16 27.7
522.06 1.6
522.65 0.0
533.15 0.9
533.72 0.0
551.18 1.1

Annotations:

ZZ redEnd--??1D-GalNAc,p--3b1D-Gal,p--??1HexNAc,p(--??1D-Gal,p/#zcleavage)--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
551.77 0.0
553.31 1.1
553.88 0.0
569.34 0.5

Annotations:

YZ redEnd--??1D-GalNAc,p--3b1D-Gal,p--??1HexNAc,p(--??1D-Gal,p/#ycleavage)--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p--3b1D-Gal,p--??1HexNAc,p(--??1D-Gal,p/#zcleavage)--??1L-Fuc,p/#ycleavage$MONO,Und,-H,0,redEnd
569.88 0.0
571.47 0.5
577.18 0.6
577.74 0.0
599.13 0.5
604.32 0.3
605.71 0.9
606.27 0.0
638.04 0.5
640.38 0.4
668.25 0.2
679.5 0.7
680.41 0.5
685.11 0.3
686.8 0.9
687.36 0.0
714.72 0.4
715.05 2.1

Annotations:

Z redEnd--??1D-GalNAc,p--3b1D-Gal,p--??1HexNAc,p(--??1D-Gal,p/#zcleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
715.35 0.6
715.77 0.2
716.38 0.4
722.79 0.6
723.03 0.9
723.6 0.0
733.32 6.9

Annotations:

Y redEnd--??1D-GalNAc,p--3b1D-Gal,p--??1HexNAc,p(--??1D-Gal,p/#ycleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
734.17 0.8
734.78 0.0
735.2 0.4
762.27 0.2
798.06 0.3
802.97 0.7
803.46 0.3
807.25 0.3
821.14 0.6
821.7 0.0
835.22 6.0
836.07 1.2
836.63 0.0
840.28 0.5
853.28 0.3
859.24 0.3
861.99 0.3
1265.9 1.5
1266.45 0.0

There are 12 similar spectra:

Id Structure Score

4243

0.98

5235

0.98

5438

0.89

5574

0.79

4864

0.78

3881

0.70

5787

0.70

5573

0.67

6737

0.64

3975

0.60

5576

0.56

7172

0.53

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 894.35
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

Report errors in this entry

UniCarb-DR Creative Commons License

Supported by SIB ExPASy  |  JST / NBDCDICP