Structure

    redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p(--??1D-Gal,p)--??1L-Fuc,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
299.01 0.4
299.32 0.8
299.9 0.0
312.06 0.2
312.4 0.3
324.18 0.2

Annotations:

^{0,4}X_{GalNAc} redEnd--??1D-GalNAc,p/#xcleavage_0_4--3b1D-Gal,p$MONO,Und,-H,0,redEnd
328.25 0.7
329.09 0.3
329.86 0.5

Annotations:

BZ ?1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p(--??1D-Gal,p/#zcleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
330.41 0.0
341.17 1.1
345.84 0.3

Annotations:

BZ ?1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p(--??1D-Gal,p)--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
347.95 0.2

Annotations:

BY ?1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p(--??1D-Gal,p/#ycleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--6b1D-GlcNAc,p(--??1D-Gal,p/#zcleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
354.06 0.4
364.98 0.2
366.28 0.3

Annotations:

CY ?1D-GalNAc,p/#ccleavage--6b1D-GlcNAc,p(--??1D-Gal,p/#ycleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
371.28 0.2
384.05 12.1

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
384.77 0.0
385.19 0.8
385.74 0.0
389.05 0.9
389.65 0.0
393.25 0.3
398.12 0.2
401.03 0.3
406.06 0.3

Annotations:

^{0,4}A_{GalNAc}Z ?1D-GalNAc,p/#acleavage_0_4--6b1D-GlcNAc,p(--??1D-Gal,p)--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
407.1 0.6
409.29 0.3
413.23 0.2
437.27 0.2
462.06 0.3
478.14 0.2
478.68 0.2
479.23 1.8
479.81 0.0
491.18 0.5
491.94 0.8
492.18 0.5
495.15 0.4
503.22 0.4
509.09 1.2

Annotations:

^{2,4}X_{GalNAc}Z redEnd--??1D-GalNAc,p/#xcleavage_2_4--6b1D-GlcNAc,p(--??1D-Gal,p)--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
509.49 0.5
510.03 1.6

Annotations:

B ?1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p(--??1D-Gal,p)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
510.32 1.4
514.22 0.2
514.64 0.2
521.07 3.4
521.32 1.4
521.81 0.4
522.23 1.4
522.85 0.0
550.62 1.0
550.89 1.0
551.2 3.9

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p(--??1D-Gal,p/#zcleavage)--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd ZZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p(--??1D-Gal,p)--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
552.9 0.3

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p(--??1D-Gal,p/#zcleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p(--??1D-Gal,p/#ycleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
553.2 0.3

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p(--??1D-Gal,p/#zcleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p(--??1D-Gal,p/#ycleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
570.0 0.5

Annotations:

^{0,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_0_4--6b1D-GlcNAc,p(--??1D-Gal,p)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
571.07 0.4

Annotations:

YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p(--??1D-Gal,p/#ycleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
635.02 0.5
635.57 0.0
656.03 0.3
673.25 1.4

Annotations:

^{2,4}X_{GalNAc} redEnd--??1D-GalNAc,p/#xcleavage_2_4--6b1D-GlcNAc,p(--??1D-Gal,p)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
674.02 0.7
674.56 0.0
677.05 0.3
679.24 0.4
680.06 0.6
680.61 0.0
705.07 0.2
714.99 1.7
715.26 2.0

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p(--??1D-Gal,p/#zcleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p(--??1D-Gal,p)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
716.27 0.3
723.07 0.3
732.22 0.5
733.14 7.6

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p(--??1D-Gal,p/#ycleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p(--??1D-Gal,p)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
733.41 3.2
733.79 0.5
734.41 0.4
741.42 0.4
742.15 0.6
742.7 0.0
775.82 0.5
776.37 0.0
787.23 0.2
796.06 0.6
796.61 0.0
799.3 0.8
799.86 0.0
808.91 0.4
834.82 0.7
835.21 1.8
835.8 0.0
836.18 1.3
836.42 0.5
836.78 0.0
851.37 0.6
852.0 0.4
853.28 1.0
853.62 0.2

There are 18 similar spectra:

Id Structure Score

1.00

0.78

4863

0.78

3975

0.76

4243

0.76

5235

0.76

5574

0.74

5438

0.73

0.70

6737

0.70

3125

0.68

3881

0.67

5573

0.67

5787

0.66

7223

0.65

4265

0.64

5250

0.64

0.55

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 894.35
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

Report errors in this entry

UniCarb-DR Creative Commons License

Supported by SIB ExPASy  |  JST / NBDCDICP