Structure

    redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--4?1HexNAc,p--??1L-Fuc,p)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
363.97 0.4
364.23 0.6

Annotations:

BY a1D-GalNAc,p/#bcleavage--3?1D-Gal,p--4?1HexNAc,p--??1L-Fuc,p/#ycleavage$MONO,Und,-H,0,redEnd CZ a1D-GalNAc,p/#ccleavage--3?1D-Gal,p--4?1HexNAc,p--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
381.8 0.6

Annotations:

CY a1D-GalNAc,p/#ccleavage--3?1D-Gal,p--4?1HexNAc,p--??1L-Fuc,p/#ycleavage$MONO,Und,-H,0,redEnd
387.2 2.7

Annotations:

BZ ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
389.36 0.5

Annotations:

ZZ redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
405.35 8.9

Annotations:

BY ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
407.36 3.1

Annotations:

YZ redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
425.15 1.0

Annotations:

YY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
428.25 0.7
453.22 0.4
478.92 0.9
491.37 0.9
515.11 0.7
525.21 0.7

Annotations:

C^{2,4}X_{Gal} ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#xcleavage_2_4)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
527.29 1.8

Annotations:

^{2,4}X_{Gal}Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#xcleavage_2_4)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
532.48 1.3
549.24 0.9

Annotations:

BZ ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p--4?1HexNAc,p/#zcleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
550.23 1.2
567.21 6.5

Annotations:

BY ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p--4?1HexNAc,p/#ycleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p--4?1HexNAc,p/#zcleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
568.41 2.0

Annotations:

^{2,4}X_{GalNAc} redEnd--??1D-GalNAc,p--3a1D-GalNAc,p/#xcleavage_2_4--6?1HexNAc,p$MONO,Und,-H,0,redEnd
569.38 2.2

Annotations:

YZ redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--4?1HexNAc,p/#ycleavage)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--4?1HexNAc,p/#zcleavage)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
571.4 0.9
587.42 1.2

Annotations:

YY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--4?1HexNAc,p/#ycleavage)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
592.42 0.7
610.41 3.2

Annotations:

Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
628.33 2.7

Annotations:

Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
646.4 0.4
650.32 0.4
653.22 0.4
664.35 0.5
670.27 1.3

Annotations:

^{0,2}X_{Gal} redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#xcleavage_0_2)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
682.32 4.4
688.2 2.8
688.51 0.8
689.26 0.7
690.43 0.9
694.95 0.4

Annotations:

BZ ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p--4?1HexNAc,p--??1L-Fuc,p)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
704.18 1.0
706.75 0.8
712.14 3.0

Annotations:

^{0,4}X_{GalNAc}Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p/#xcleavage_0_4--3?1D-Gal,p--4?1HexNAc,p--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
712.4 0.7
730.39 89.9

Annotations:

^{2,4}X_{Gal} redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#xcleavage_2_4)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
731.26 0.7

Annotations:

CY ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p--4?1HexNAc,p--??1L-Fuc,p)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
731.64 0.5
748.4 2.5
752.06 0.6

Annotations:

BZ ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p--4?1HexNAc,p--??1L-Fuc,p/#zcleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
752.47 0.5
754.07 0.4
754.28 0.4
754.62 0.7
772.44 5.6

Annotations:

Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--4?1HexNAc,p/#zcleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
774.19 0.9
789.34 1.0
790.38 169.4

Annotations:

Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--4?1HexNAc,p/#ycleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
791.39 1.4
807.69 0.4
824.91 0.8
825.51 1.8
828.11 0.8
846.52 0.5
867.34 19.5
868.53 0.7
884.76 0.8
885.45 11.3
886.36 0.6
894.49 0.4
898.61 0.7
907.07 0.6
913.72 0.5
915.36 2.4
916.28 3.3

Annotations:

B ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p--4?1HexNAc,p--??1L-Fuc,p)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
916.51 1.3
917.66 0.5
918.48 1.0

Annotations:

Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--4?1HexNAc,p--??1L-Fuc,p)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
927.39 36.7
928.0 0.6
928.52 0.8
933.35 0.6

Annotations:

Y^{0,4}X_{HexNAc} redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--4?1HexNAc,p--??1L-Fuc,p/#ycleavage)--6?1HexNAc,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd
936.19 0.7

Annotations:

Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--4?1HexNAc,p--??1L-Fuc,p)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
937.41 0.6
939.36 0.5
939.63 0.6
956.45 0.9
957.5 3.7
958.32 0.6
975.44 7.3

Annotations:

Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--4?1HexNAc,p--??1L-Fuc,p/#zcleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
989.29 0.6
993.5 0.8

Annotations:

Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--4?1HexNAc,p--??1L-Fuc,p/#ycleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
994.42 1.0
994.89 0.6
1018.72 0.7
1034.15 0.8
1062.19 0.7
1079.47 38.0
1080.54 2.8
1090.46 0.7
1096.97 0.8
1097.38 3.2
1097.72 0.9
1103.7 0.7

There are 9 similar spectra:

Id Structure Score

1.00

5457

0.96

7176

0.96

4816

0.95

0.95

7155

0.94

5460

0.92

5456

0.84

5458

0.50

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1138.45
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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