Structure

    redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p)--6a2D-NeuAc,p--8a2D-NeuAc,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
477.1 0.5

Annotations:

Z^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p/#zcleavage)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd ZZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#zcleavage)--6a2D-NeuAc,p--8a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
477.69 0.0
495.38 0.7

Annotations:

YZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#ycleavage)--6a2D-NeuAc,p--8a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#zcleavage)--6a2D-NeuAc,p--8a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd Y^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p/#ycleavage)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
495.94 0.0
519.16 0.9
519.71 0.0
520.14 1.1
520.7 0.0
537.27 7.0
537.96 0.0
562.87 1.5
563.44 0.0
569.54 0.6

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
570.12 0.0
580.45 0.5
581.21 38.7

Annotations:

B ?1D-GalNAc,p/#bcleavage--6a2D-NeuAc,p--8a2D-NeuAc,p$MONO,Und,-H,0,redEnd
582.11 0.9
582.53 1.5
583.1 0.0
587.41 1.2

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
588.04 0.3
638.12 0.7
638.69 0.0
651.93 0.3
652.48 0.0
716.41 0.6

Annotations:

YY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p/#ycleavage)--6a2D-NeuAc,p--8a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
716.95 0.0
740.35 1.4
740.94 0.0
741.38 0.7
741.94 0.0
770.45 1.4
771.01 0.0
800.44 2.6
801.07 0.0
818.5 0.7
819.02 0.0
826.1 0.7
826.65 0.0
830.27 0.8
834.17 1.1
834.72 0.0
835.35 0.5
835.91 0.0
842.38 0.7
842.64 0.5
843.2 0.0
858.03 0.4
859.79 2.0
860.4 24.2

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p)--6a2D-NeuAc,p--8a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
861.32 1.1
861.88 0.0
877.49 3.4
878.4 274.1

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p)--6a2D-NeuAc,p--8a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
879.12 6.2
879.48 9.2
880.21 0.0
911.57 1.4
912.13 0.0
915.52 1.0
916.07 0.0
943.64 0.7
944.2 0.0
999.31 0.4
999.86 0.0
1030.48 0.8
1031.04 0.0
1043.56 0.8
1044.11 0.0
1052.3 0.4
1052.86 0.0
1073.67 0.5
1074.22 0.0
1081.36 0.9
1081.94 0.0
1090.3 0.8
1090.86 0.0
1091.19 0.7
1091.77 0.0
1107.41 2.5
1108.03 0.0
1109.12 2.9
1109.61 1.4
1109.95 0.6
1110.52 0.0
1111.0 0.6
1111.55 0.0
1117.77 0.6
1118.3 0.0
1123.56 0.5
1124.12 0.0
1125.35 8.6
1125.61 7.1
1125.9 5.0
1126.24 4.4
1126.99 0.0
1133.44 4.2
1134.46 1.1
1135.04 0.0

There are 9 similar spectra:

Id Structure Score

1.00

4895

0.99

0.99

4897

0.99

0.99

7232

0.99

8041

0.99

7156

0.98

8040

0.94

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1168.43
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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