Structure

    redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p)--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
364.14 1.4

Annotations:

BY ?1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd B b1D-GlcNAc,p/#bcleavage--4b1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd
388.97 2.6

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
407.23 9.7

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
424.11 1.5

Annotations:

^{0,4}A_{GalNAc}Y ?1D-GalNAc,p/#acleavage_0_4--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd ^{2,4}A_{GlcNAc} b1D-GlcNAc,p/#acleavage_2_4--4b1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd
466.0 0.6
466.39 1.2
475.17 0.7
484.26 0.9

Annotations:

^{0,2}A_{GlcNAc} b1D-GlcNAc,p/#acleavage_0_2--4b1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd
493.47 0.5
503.17 1.2
509.27 0.5

Annotations:

Z^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6b1D-GlcNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal}Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_2_4)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ^{2,4}X_{GalNAc}Z redEnd--??1D-GalNAc,p/#xcleavage_2_4--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
527.23 3.3

Annotations:

Y^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal}Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_2_4)--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd ^{2,4}X_{GalNAc}Y redEnd--??1D-GalNAc,p/#xcleavage_2_4--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
527.8 0.9
528.23 0.5
545.19 1.3
551.34 1.8

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
567.2 3.2

Annotations:

B ?1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd
569.11 16.3

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
569.37 14.5
570.31 1.3
587.29 6.0

Annotations:

YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
588.28 0.5
627.24 2.5

Annotations:

^{0,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_0_4--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd
627.41 2.0
637.32 1.3
646.32 0.5
665.09 0.6
683.45 0.8
687.4 1.0
688.24 0.6
689.6 1.2

Annotations:

^{2,4}X_{Gal}Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_2_4)--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
707.3 2.4
708.27 0.5
716.08 1.1
716.46 1.2
724.46 0.5
730.48 5.4

Annotations:

^{2,4}X_{GalNAc} redEnd--??1D-GalNAc,p/#xcleavage_2_4--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd
731.38 0.7

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
748.3 4.1
749.18 18.5

Annotations:

YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
749.53 6.9
750.37 1.1
750.6 0.5
772.33 78.9

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd
773.52 8.5
790.37 23.4

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd
791.34 1.6
801.6 0.6
826.17 0.7
857.5 0.7
858.34 1.0
874.59 0.7
878.52 1.1

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p)--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
892.24 8.9

Annotations:

^{2,4}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_2_4)--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd
892.63 4.1
893.25 1.1
894.04 0.8
909.9 0.6
910.33 7.1
910.71 1.8
911.39 2.1
934.28 0.7
934.56 0.9

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd
935.43 0.5
943.98 0.7
952.38 194.5

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd
953.34 30.7
954.59 0.6
980.35 0.7
1003.19 0.7
1004.32 0.5
1005.54 0.6
1022.49 1.6

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p)--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
1023.1 0.7
1037.38 0.5
1062.23 1.0
1063.13 1.0
1068.1 0.7
1081.56 2.2
1081.83 0.6
1082.34 2.5
1082.66 0.9
1123.35 0.8
1140.8 1.4
1149.36 2.0
1165.17 2.9
1165.62 3.8
1166.42 2.7
1180.48 0.5
1182.14 0.5
1183.24 7.6
1183.57 7.6
1184.01 0.6
1184.47 2.8
1199.35 0.6
1201.71 0.7
1202.73 0.5
1203.41 0.7
1207.42 2.2
1367.2 0.8

There are 10 similar spectra:

Id Structure Score

1.00

0.98

3157

0.97

3779

0.94

4279

0.94

8048

0.93

8046

0.90

8049

0.76

5836

0.71

8047

0.63

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1242.47
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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