Structure

    redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

200.0400.0600.0800.01000m/z0.0204060Abundance
Peak Intensity
178.46 0.3
184.04 0.7

Annotations:

BZ ?1D-GalNAc,p/#bcleavage--3b1D-GlcNAc,p--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
200.87 0.4
202.0 46.2

Annotations:

BY ?1D-GalNAc,p/#bcleavage--3b1D-GlcNAc,p--??1L-Fuc,p/#ycleavage$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--3b1D-GlcNAc,p--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
202.72 0.9
203.1 0.7
204.04 21.7

Annotations:

Z redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
204.74 0.0
205.42 0.3
222.13 6.3

Annotations:

Y redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
222.76 0.0
223.18 0.6
238.88 0.3
245.32 0.4
256.99 0.3
257.88 0.5
259.14 0.4
269.4 0.6
272.33 0.3
287.3 0.3
288.05 0.2
296.21 0.3
299.28 0.3
305.88 0.2
312.17 0.3
317.19 3.3
318.12 0.3
330.28 0.4
341.28 0.3
346.02 0.3
347.27 1.3
348.18 5.9

Annotations:

B ?1D-GalNAc,p/#bcleavage--3b1D-GlcNAc,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
349.08 3.0
349.71 0.0
358.73 0.6
359.19 0.5
363.61 0.3
365.96 0.5

Annotations:

C ?1D-GalNAc,p/#ccleavage--3b1D-GlcNAc,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
380.96 0.5
388.89 0.6
399.71 0.4
407.3 1.2

Annotations:

Z redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
407.98 0.3
408.3 1.0

Annotations:

^{2,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_2_4--3b1D-GlcNAc,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
420.15 0.4
421.2 0.3
422.34 0.6
423.15 0.3
423.47 0.3
426.28 1.6
428.8 0.2
451.18 1.1
452.53 0.4
459.74 0.7
463.19 0.8
463.39 0.3
464.34 0.5
467.52 0.3
468.11 0.5
469.04 0.4
469.27 0.4
470.39 0.2
480.85 0.3
483.83 0.4
493.47 0.5
495.97 0.6
496.18 0.6
498.89 0.3
502.52 0.5
508.13 0.5
508.65 0.7
509.01 0.7
509.54 0.5
510.21 0.9
511.23 57.9
512.23 10.2
513.26 0.4
514.02 0.5
517.88 0.5
523.12 0.3
523.77 0.5
524.88 0.3
525.81 1.5
527.07 0.7
529.38 0.2
530.27 0.9
531.2 0.2
535.1 0.5
535.64 0.8
539.59 1.8
540.46 0.7
540.87 1.1
544.6 0.6
551.98 0.3
819.1 0.5
860.74 0.3
907.15 0.4
946.86 0.6
1001.79 0.3
1045.15 0.5

There are 16 similar spectra:

Id Structure Score

1.00

5414

0.98

7973

0.98

0.98

7974

0.96

0.96

0.95

4799

0.95

0.95

6794

0.95

7975

0.95

7401

0.94

7430

0.94

5691

0.92

5413

0.91

7136

0.70

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 570.24
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

Report errors in this entry

UniCarb-DR Creative Commons License

Supported by SIB ExPASy  |  JST / NBDCDICP