Structure

    redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p)--6a2D-NeuGc,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
203.99 7.7

Annotations:

YZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#ycleavage)--6a2D-NeuGc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#zcleavage)--6a2D-NeuGc,p/#ycleavage$MONO,Und,-H,0,redEnd
204.24 3.3
208.08 2.5
209.99 4.9
212.14 1.6
216.13 2.6
218.02 47.9
220.14 2.2

Annotations:

C ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p$MONO,Und,-H,0,redEnd
222.14 6.3

Annotations:

YY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#ycleavage)--6a2D-NeuGc,p/#ycleavage$MONO,Und,-H,0,redEnd
228.11 4.4
230.04 15.4
234.22 1.8
235.97 29.0
256.15 2.3
262.25 2.6

Annotations:

^{2,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_2_4--3a1D-GalNAc,p$MONO,Und,-H,0,redEnd
270.0 2.5
287.02 1.9
288.06 41.4
290.06 4.7
292.07 17.9

Annotations:

Y^{0,2}X_{NeuGc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#ycleavage)--6a2D-NeuGc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
304.06 3.2
304.68 1.9
305.07 1.9
306.06 2150.9

Annotations:

B ?1D-GalNAc,p/#bcleavage--6a2D-NeuGc,p$MONO,Und,-H,0,redEnd
307.07 20.3
308.12 2.0
322.01 4.7
324.08 88.9

Annotations:

C ?1D-GalNAc,p/#ccleavage--6a2D-NeuGc,p$MONO,Und,-H,0,redEnd
324.61 3.1
327.65 1.8
347.12 12.2
349.94 3.0
352.1 3.1
365.08 21.0

Annotations:

^{0,4}X_{GalNAc} redEnd--??1D-GalNAc,p/#xcleavage_0_4--3a1D-GalNAc,p$MONO,Und,-H,0,redEnd
366.18 1.7

Annotations:

^{0,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_0_4--6a2D-NeuGc,p$MONO,Und,-H,0,redEnd
405.12 27.6
407.14 236.4

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p)--6a2D-NeuGc,p/#zcleavage$MONO,Und,-H,0,redEnd
408.11 5.9
417.12 35.0
423.19 1.6
425.14 395.0

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p)--6a2D-NeuGc,p/#ycleavage$MONO,Und,-H,0,redEnd
426.29 7.8
432.94 2.2
433.21 2.3
433.83 1.7
435.28 2.1
441.09 6.3
445.13 18.8
449.15 3.2
463.33 4.0
467.14 64.9
475.17 4.5
476.15 1.5
477.21 33.3
483.07 8.0
484.86 4.0
485.21 5.0
493.02 37.6
493.29 31.5
494.13 1.7
495.15 90.8

Annotations:

^{0,2}X_{NeuGc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p)--6a2D-NeuGc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
500.29 5.1
509.15 2.6
511.14 15.4

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#zcleavage)--6a2D-NeuGc,p$MONO,Und,-H,0,redEnd
513.16 21.9
518.04 13.5
518.39 7.1
529.22 9.7

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#ycleavage)--6a2D-NeuGc,p$MONO,Und,-H,0,redEnd
530.02 2.5
530.36 3.9
531.26 3.6
531.5 1.6
547.97 3.0
548.31 2.8
562.15 1.5
578.11 1.7
594.16 10.7
596.26 2.6
612.33 1.7
620.13 14.4
620.51 1.9
624.23 18.7
628.31 5.9
636.22 2.6
638.2 945.3
639.25 40.3
654.28 18.9
656.16 40.2
657.17 1.7
670.11 3.9
670.37 3.0
672.02 3.6
672.43 2.1
678.19 3.1
684.21 2.0
686.26 2.0
688.23 20.2
690.25 3.0
696.33 34.1
697.33 2.5

There are 13 similar spectra:

Id Structure Score

1.00

5707

1.00

6715

1.00

7989

0.98

6801

0.98

5425

0.98

6714

0.90

5706

0.90

8114

0.85

3751

0.83

7403

0.75

7432

0.75

7145

0.72

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 731.28
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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