Structure

    redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1S)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
241.04 9.5

Annotations:

B ?1D-GalNAc,p/#bcleavage--3b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd
244.23 0.5
259.36 0.5

Annotations:

C ?1D-GalNAc,p/#ccleavage--3b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd
284.02 0.4
290.28 0.3

Annotations:

B ?1D-GalNAc,p/#bcleavage--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
302.14 0.7
302.31 0.4
308.11 1.0

Annotations:

C ?1D-GalNAc,p/#ccleavage--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
309.39 0.3
326.13 1.5
330.08 0.2
339.03 0.3
342.07 0.3
343.11 0.3
348.34 0.2
352.07 0.6
354.08 0.2
366.3 0.5

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1S/#lcleavage)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
370.18 9.7
384.3 0.2

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1S/#lcleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
388.17 0.5
404.08 0.7

Annotations:

^{0,4}X_{GalNAc} redEnd--??1D-GalNAc,p/#xcleavage_0_4--3b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd
404.79 0.4
406.32 1.6
411.47 0.4
415.21 0.2
420.93 0.5
422.23 0.6
429.93 0.5
435.04 0.2
444.27 1.0
446.25 4.3

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1S)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
462.23 3.6
462.7 0.5
463.23 5.2
464.24 5135.5

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1S)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
465.21 2.3
466.23 5.7
474.32 0.6
477.27 1.1
490.36 0.7
497.23 0.6
506.32 0.3
507.66 0.3
513.1 1.1

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
514.62 0.2
518.45 0.4
519.32 0.6
520.32 0.3
525.28 0.3
531.05 0.4
533.46 0.3
537.2 0.7
543.17 1.5
543.61 0.5
547.37 0.5
555.24 0.2
556.13 0.3
556.72 0.4
557.19 0.3
567.44 1.5
579.07 0.4
579.49 0.4
593.27 0.5
597.3 8.8
609.82 0.4
615.46 0.2
621.06 0.3
621.49 0.4
632.52 0.4
637.02 0.3
639.34 0.8
640.25 0.4
649.02 1.4
650.1 0.2
657.41 29.4
667.29 1.0
669.16 0.5
672.47 0.2
672.87 0.3
673.29 2.5
674.52 0.7
675.38 341.2

Annotations:

redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1S/#lcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
684.47 0.4
691.43 0.4
693.39 0.6
695.21 7.0
695.48 6.8
702.97 0.4
711.37 363.0
712.08 0.8
712.43 0.9
719.29 0.3
721.08 0.6
723.46 0.4
723.73 1.1
724.89 0.3
726.31 0.3
898.37 0.7
1093.55 0.4

There are 14 similar spectra:

Id Structure Score

5429

1.00

3497

1.00

7626

1.00

5713

1.00

6586

1.00

6587

1.00

7434

1.00

7405

1.00

5714

0.99

7183

0.99

7695

0.99

7170

0.99

7690

0.98

7683

0.98

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 754.21
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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