Structure

    redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p(--??1HexNAc,p)--??1L-Fuc,p)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
365.7 1.3
366.27 0.0
366.8 0.0
367.36 0.0
370.84 0.9
371.39 0.0
371.94 0.0
372.47 0.0
384.08 0.9

Annotations:

YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p/#ycleavage)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
384.63 0.0
385.19 0.0
385.71 0.0
388.72 0.7
389.28 0.0
389.8 0.0
407.13 45.9

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd
408.02 3.8
408.24 1.5
408.85 0.0
409.37 0.0
409.91 0.0
526.39 0.8
527.27 7.7
527.94 0.0
528.47 0.0
529.02 0.0
545.41 0.8
545.96 0.0
546.52 0.0
547.04 0.0
551.14 2.5

Annotations:

B b1D-Gal,p/#bcleavage--??1HexNAc,p(--??1L-Fuc,p)--??1HexNAc,p$MONO,Und,-H,0,redEnd
551.32 0.8
551.89 0.0
552.27 1.0

Annotations:

^{2,4}A_{GalNAc}Z ?1D-GalNAc,p/#acleavage_2_4--3b1D-Gal,p--??1HexNAc,p(--??1L-Fuc,p)--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
552.53 0.5
553.11 0.0
553.63 0.0
587.13 71.5

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p/#ycleavage)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd
588.4 3.1
589.0 0.0
589.43 1.1
589.97 0.0
590.53 0.0
591.05 0.0
627.11 0.9

Annotations:

^{2,4}A_{GalNAc}Y ?1D-GalNAc,p/#acleavage_2_4--3b1D-Gal,p--??1HexNAc,p(--??1L-Fuc,p/#ycleavage)--??1HexNAc,p$MONO,Und,-H,0,redEnd
627.69 0.0
628.2 0.0
628.75 0.0
640.35 0.8
640.91 0.0
641.45 0.0
652.98 1.3
653.53 0.0
654.06 0.0
654.61 0.0
681.93 1.1
682.49 0.0
683.03 0.0
683.56 0.0
713.2 1.4

Annotations:

B ?1D-GalNAc,p/#bcleavage--3b1D-Gal,p--??1HexNAc,p(--??1L-Fuc,p)--??1HexNAc,p$MONO,Und,-H,0,redEnd
713.77 0.0
714.29 0.0
714.85 0.0
724.21 13.6
724.96 0.0
725.52 0.0
726.23 1.2
726.78 0.0
727.33 0.0
727.86 0.0
731.03 0.7

Annotations:

C ?1D-GalNAc,p/#ccleavage--3b1D-Gal,p--??1HexNAc,p(--??1L-Fuc,p)--??1HexNAc,p$MONO,Und,-H,0,redEnd
731.61 0.0
732.12 0.0
772.24 0.8

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p(--??1L-Fuc,p/#ycleavage)--??1HexNAc,p)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p(--??1L-Fuc,p/#zcleavage)--??1HexNAc,p)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p(--??1L-Fuc,p/#zcleavage)--??1HexNAc,p/#ycleavage)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p(--??1L-Fuc,p/#ycleavage)--??1HexNAc,p/#zcleavage)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd
772.79 0.0
773.16 0.6
773.5 1.6

Annotations:

^{2,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_2_4--3b1D-Gal,p--??1HexNAc,p(--??1L-Fuc,p)--??1HexNAc,p$MONO,Und,-H,0,redEnd
774.05 0.0
774.61 0.0
775.12 0.0
790.19 1.4

Annotations:

YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p(--??1L-Fuc,p/#ycleavage)--??1HexNAc,p)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p(--??1L-Fuc,p/#ycleavage)--??1HexNAc,p/#ycleavage)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd
790.74 0.0
791.28 0.0
791.81 0.0
830.06 1.4
830.61 0.0
831.15 0.0
831.69 0.0
1079.44 2.8
1080.11 0.0
1080.62 0.0
1081.19 0.0
1097.51 1.2
1098.06 0.0
1098.61 0.0
1099.13 0.0
1140.21 1.6
1140.44 0.9
1141.02 0.0
1141.54 0.0

There are 8 similar spectra:

Id Structure Score

5455

0.98

5749

0.97

5459

0.85

5458

0.85

5750

0.83

4892

0.82

4893

0.77

4817

0.74

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1138.45
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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