Structure

    redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p)--6b1D-GlcNAc,p(--??1HexNAc,p)--??1L-Fuc,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
348.04 0.3

Annotations:

BY a1D-GalNAc,p/#bcleavage--6?1HexNAc,p(--??1L-Fuc,p)--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd CZ a1D-GalNAc,p/#ccleavage--6?1HexNAc,p(--??1L-Fuc,p)--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
363.78 0.4
364.05 1.0

Annotations:

BY ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
365.03 0.6
389.06 0.3

Annotations:

ZZ redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
390.09 0.3

Annotations:

^{0,4}A_{GalNAc}Z a1D-GalNAc,p/#acleavage_0_4--6?1HexNAc,p(--??1L-Fuc,p)--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
393.0 0.3
407.4 0.7

Annotations:

YZ redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
408.26 0.2

Annotations:

^{0,4}A_{GalNAc}Y a1D-GalNAc,p/#acleavage_0_4--6?1HexNAc,p(--??1L-Fuc,p)--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
425.38 0.4

Annotations:

YY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
426.27 0.4
437.1 0.3
461.19 0.3
467.08 0.6
479.36 0.5
480.17 0.2
485.3 0.8
491.32 0.3
501.04 0.3
510.01 0.7
527.2 15.7

Annotations:

^{0,4}X_{GalNAc} redEnd--??1D-GalNAc,p--3a1D-GalNAc,p/#xcleavage_0_4--3?1D-Gal,p$MONO,Und,-H,0,redEnd
528.33 1.2
545.2 2.0
546.13 1.1
549.11 0.8
551.17 7.1

Annotations:

B a1D-GalNAc,p/#bcleavage--6?1HexNAc,p(--??1L-Fuc,p)--??1HexNAc,p$MONO,Und,-H,0,redEnd
552.2 1.2
568.15 0.2
569.37 0.6

Annotations:

C a1D-GalNAc,p/#ccleavage--6?1HexNAc,p(--??1L-Fuc,p)--??1HexNAc,p$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
570.0 0.2
574.3 0.4
574.57 0.6
575.12 0.3
587.19 106.8

Annotations:

Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
588.2 13.1
603.96 0.4
610.19 0.4
611.14 0.8

Annotations:

^{0,4}A_{GalNAc} a1D-GalNAc,p/#acleavage_0_4--6?1HexNAc,p(--??1L-Fuc,p)--??1HexNAc,p$MONO,Und,-H,0,redEnd
622.4 0.2
653.25 0.2
663.61 0.3
664.16 2.5
664.45 1.0
664.65 0.5
665.23 1.4
675.15 0.3
682.17 3.0
682.86 0.6
683.2 0.7
688.25 0.4
712.35 0.4
712.8 0.2

Annotations:

CZ ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p(--??1L-Fuc,p)--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd BY ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p(--??1L-Fuc,p)--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
724.25 6.3
725.13 0.4
725.42 0.5
729.93 0.6
730.29 1.8
730.56 0.3
731.18 0.5

Annotations:

CY ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p(--??1L-Fuc,p)--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
736.15 0.2

Annotations:

BZ ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p(--??1L-Fuc,p)--??1HexNAc,p$MONO,Und,-H,0,redEnd
754.23 0.5

Annotations:

BY ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p(--??1L-Fuc,p)--??1HexNAc,p$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p(--??1L-Fuc,p)--??1HexNAc,p$MONO,Und,-H,0,redEnd ZZ redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p(--??1L-Fuc,p/#zcleavage)--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
772.28 1.2

Annotations:

CY ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p(--??1L-Fuc,p)--??1HexNAc,p$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p(--??1L-Fuc,p/#zcleavage)--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd YZ redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p(--??1L-Fuc,p/#ycleavage)--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
773.04 0.2
790.27 6.9

Annotations:

YY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p(--??1L-Fuc,p/#ycleavage)--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
791.17 0.4
791.64 0.4
808.36 0.3
813.2 0.2

Annotations:

YZ redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p(--??1L-Fuc,p/#zcleavage)--??1HexNAc,p$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p(--??1L-Fuc,p/#ycleavage)--??1HexNAc,p$MONO,Und,-H,0,redEnd
821.23 0.5
828.13 0.3
847.32 0.3
848.14 0.2
868.15 0.5
885.04 0.2
894.5 0.3
916.31 1.0

Annotations:

B ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p(--??1L-Fuc,p)--??1HexNAc,p$MONO,Und,-H,0,redEnd
917.09 0.5

Annotations:

^{2,4}X_{GalNAc} redEnd--??1D-GalNAc,p--3a1D-GalNAc,p/#xcleavage_2_4--6?1HexNAc,p(--??1L-Fuc,p)--??1HexNAc,p$MONO,Und,-H,0,redEnd
918.22 0.2
918.67 0.5

Annotations:

Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p(--??1L-Fuc,p)--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
927.53 1.1
939.47 0.3
952.94 0.7
958.43 0.3
993.95 0.3
997.82 0.4
1030.96 0.2
1031.43 0.4
1032.02 0.2
1037.62 0.4
1058.15 0.6
1061.26 0.4
1078.2 0.2
1079.3 21.1
1080.44 8.2
1094.96 0.2
1097.38 1.3
1098.45 1.1
1102.23 0.4
1104.98 0.2
1140.52 2.2

There are 8 similar spectra:

Id Structure Score

5750

0.98

5459

0.93

4893

0.91

5749

0.90

5455

0.87

5458

0.84

4817

0.84

4891

0.82

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1138.45
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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