Structure

    redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p(--??1HexNAc,p)--??1L-Fuc,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
384.01 0.3

Annotations:

YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p/#ycleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
452.99 0.3

Annotations:

^{2,4}X_{GalNAc} redEnd--??1D-GalNAc,p/#xcleavage_2_4--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
453.85 0.2
454.43 0.4

Annotations:

Y^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p/#ycleavage)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
459.12 0.2
477.3 0.4
495.33 0.3

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
502.86 0.1
513.27 0.3

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
521.08 0.2
521.44 0.2
551.14 2.6

Annotations:

B b1D-Gal,p/#bcleavage--??1HexNAc,p(--??1HexNAc,p)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
551.76 0.0
552.29 0.2

Annotations:

^{2,4}A_{GalNAc}Z ?1D-GalNAc,p/#acleavage_2_4--3b1D-Gal,p--??1HexNAc,p(--??1HexNAc,p/#zcleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
573.14 0.2
597.19 0.6
597.45 0.4
615.14 1.2
615.43 2.3
616.23 1.1
616.51 0.6
620.03 0.5
657.21 4.5

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
658.04 0.4
658.53 0.6
675.27 15.4

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
675.75 0.2
676.4 2.9
677.0 0.0
683.54 0.6
692.29 0.2
713.19 0.5

Annotations:

B ?1D-GalNAc,p/#bcleavage--3b1D-Gal,p--??1HexNAc,p(--??1HexNAc,p)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
713.62 0.2
714.37 0.2
734.38 0.2
752.36 0.2
759.89 0.4
794.13 0.3
794.63 0.2
841.07 0.2
844.94 0.1
909.39 0.2
913.15 0.4
918.44 0.4

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p(--??1HexNAc,p)--??1L-Fuc,p)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
935.98 0.2
936.52 0.3

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p(--??1HexNAc,p)--??1L-Fuc,p)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
953.03 0.1
966.45 0.4

Annotations:

Y^{3,5}X_{Fuc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p(--??1HexNAc,p/#ycleavage)--??1L-Fuc,p/#xcleavage_3_5)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
971.48 0.2
986.62 0.2
987.63 0.2
1006.19 2.1
1006.51 2.6

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p(--??1HexNAc,p/#zcleavage)--??1L-Fuc,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd ^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p(--??1HexNAc,p)--??1L-Fuc,p)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
1007.43 0.5
1022.03 0.3
1022.56 0.3
1024.5 0.3

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p(--??1HexNAc,p/#ycleavage)--??1L-Fuc,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1041.72 0.2
1044.44 0.3
1048.16 0.2
1060.39 0.1
1063.6 0.6

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p(--??1HexNAc,p)--??1L-Fuc,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1063.99 0.2
1069.39 0.2
1081.41 0.5

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p(--??1HexNAc,p)--??1L-Fuc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1082.16 0.5
1082.52 0.2
1090.33 0.2
1106.55 0.2
1106.98 0.4
1120.15 0.2
1120.53 0.9
1121.14 0.6
1129.5 0.2
1132.9 0.2
1139.7 0.1
1146.42 0.2
1147.89 0.2
1149.29 1.4
1149.56 0.2
1156.68 0.2
1162.86 0.1
1164.77 0.3
1165.36 0.4
1166.7 0.6
1167.45 11.5
1168.31 1.8
1168.68 2.4
1169.26 0.0
1177.44 0.6
1177.98 0.0
1178.4 0.3
1180.85 0.2
1181.74 0.3
1182.2 0.3
1185.44 0.1
1191.56 1.0
1192.12 0.0
1196.62 0.1
1389.73 0.2

There are 10 similar spectra:

Id Structure Score

1.00

5462

0.95

5751

0.67

5463

0.55

5464

0.54

4900

0.54

0.54

4899

0.52

0.52

5835

0.51

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1226.47
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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