Structure

    redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p--??1L-Fuc,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
389.24 1.3

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p/#zcleavage)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
407.49 0.9

Annotations:

YZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p/#ycleavage)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p/#zcleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
425.49 0.9

Annotations:

YY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p/#ycleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
501.3 0.9
527.21 5.0

Annotations:

^{0,4}X_{GalNAc}Y redEnd--??1D-GalNAc,p/#xcleavage_0_4--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
528.18 2.4

Annotations:

C a1D-GalNAc,p/#ccleavage--??1D-Gal,p--??1HexNAc,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
528.47 1.6
569.3 8.0

Annotations:

YZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p/#ycleavage)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p/#zcleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
570.4 1.0
587.26 33.4

Annotations:

YY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p/#ycleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
588.29 6.0
622.54 0.9
658.32 0.9
664.37 2.2
665.16 0.8
682.26 3.8
688.5 0.6
697.98 0.6

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
710.26 1.0
716.35 2.0

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
717.33 2.2
724.39 5.6
745.98 1.7
754.12 0.9

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#zcleavage)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
772.34 1.0

Annotations:

YZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#zcleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
773.39 0.9

Annotations:

^{2,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_2_4--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
773.98 1.2
791.69 0.7
799.94 1.4
800.45 0.7
801.09 0.8
805.34 0.8
818.35 14.1
819.28 3.0
841.07 0.9
858.33 1.1
860.29 3.9

Annotations:

Y^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
860.5 3.4
861.22 1.8
861.48 2.7
877.56 0.6
878.4 12.9

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
879.12 2.5
879.55 1.3
894.93 0.6
918.2 2.2
918.49 2.4

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p--??1L-Fuc,p)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
925.2 0.9
926.19 1.4
936.45 12.5

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p--??1L-Fuc,p)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
936.79 2.9
937.31 8.0
955.59 0.8
985.29 1.6
987.96 0.7
988.5 2.9
989.46 1.7
998.31 0.7
1001.15 0.6
1004.35 3.5
1006.48 27.7

Annotations:

^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p--??1L-Fuc,p)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
1007.46 7.1
1011.36 0.7
1021.49 1.6
1022.57 1.2
1029.67 3.7
1046.51 0.8
1059.39 3.4
1059.92 2.2
1060.39 1.2
1064.5 2.9
1081.58 7.6

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1082.19 3.6
1082.5 5.4
1083.82 0.8
1090.43 0.7
1090.91 0.6
1099.12 0.7
1102.46 1.4
1110.55 1.8
1119.56 2.1
1120.21 0.7
1143.46 1.6
1148.6 1.6
1149.4 24.3
1149.88 1.8
1150.42 2.3
1150.84 0.7
1155.6 1.5
1165.83 1.4
1167.45 148.2
1168.45 56.9
1176.64 1.0
1185.38 2.2
1186.15 1.5
1186.65 0.7
1191.17 1.1
1310.3 0.7
1369.44 1.3
1485.92 2.4

There are 13 similar spectra:

Id Structure Score

1.00

4899

0.99

0.99

5463

0.93

5464

0.92

6819

0.88

5835

0.81

5753

0.64

5462

0.58

5752

0.58

5751

0.55

4901

0.54

0.54

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1226.47
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

Report errors in this entry

UniCarb-DR Creative Commons License

Supported by SIB ExPASy  |  JST / NBDCDICP