Structure

    redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p--??1L-Fuc,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
364.17 2.0

Annotations:

BY ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd BY a1D-GalNAc,p/#bcleavage--??1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage$MONO,Und,-H,0,redEnd CZ a1D-GalNAc,p/#ccleavage--??1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
407.2 1.0

Annotations:

YZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p/#ycleavage)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p/#zcleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
425.12 2.1

Annotations:

YY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p/#ycleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
437.44 0.8
453.47 1.2

Annotations:

^{2,4}X_{GalNAc} redEnd--??1D-GalNAc,p/#xcleavage_2_4--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
455.99 1.0
459.26 1.1
500.25 0.7
524.06 0.7
527.11 6.8

Annotations:

^{0,4}X_{GalNAc}Y redEnd--??1D-GalNAc,p/#xcleavage_0_4--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
527.32 3.7
528.38 0.7

Annotations:

C a1D-GalNAc,p/#ccleavage--??1D-Gal,p--??1HexNAc,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
567.41 0.7

Annotations:

BY ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
569.23 16.6

Annotations:

YZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p/#ycleavage)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p/#zcleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
570.21 3.7
587.25 48.1

Annotations:

YY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p/#ycleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
588.33 3.9
588.58 0.6
594.38 0.8
598.21 0.7
622.39 1.7
656.32 0.8
656.97 1.5

Annotations:

Y^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p/#ycleavage)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
657.59 1.0
664.34 6.9
665.34 1.9
682.14 4.2
682.5 3.6
683.4 1.9
698.53 0.6

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
706.34 0.9
716.27 1.1

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
717.28 2.9
717.48 1.3
724.33 6.7
754.06 1.5

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#zcleavage)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
754.53 0.7
772.32 2.3

Annotations:

YZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#zcleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
794.11 0.8
800.26 4.8
800.63 1.4
801.13 1.9
801.33 1.2
816.09 1.0
818.35 23.6
819.07 3.1
819.44 3.9
834.35 1.1
842.55 1.1

Annotations:

Z^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#zcleavage)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
859.29 1.5
860.35 15.1

Annotations:

Y^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
861.38 2.8
877.28 1.1
878.38 28.5

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
879.37 5.3
879.66 0.9
895.11 0.7
918.52 3.2

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p--??1L-Fuc,p)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
927.12 0.7
929.19 0.8
936.51 13.2

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p--??1L-Fuc,p)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
937.37 7.6
955.2 2.1
985.37 2.1
988.48 3.3
989.42 1.8
997.3 1.6
997.49 0.8
998.42 0.8
1003.11 1.7
1006.42 41.5

Annotations:

^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p--??1L-Fuc,p)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
1007.4 14.6
1021.38 1.3
1022.59 1.6
1029.09 1.9
1029.52 1.6
1059.5 2.9
1064.48 1.4
1081.56 3.9

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1081.86 0.9

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1082.1 0.7
1082.56 3.8
1083.38 0.8
1089.29 0.9
1101.45 2.0
1111.71 1.0
1119.57 1.8
1120.59 2.0
1135.88 0.7
1149.47 25.1
1150.21 2.9
1150.53 7.4
1165.51 1.0
1166.58 0.6
1167.44 191.0
1168.47 79.7
1185.12 0.8
1185.48 1.8
1191.56 2.1
1191.86 0.8

There are 13 similar spectra:

Id Structure Score

1.00

4900

0.99

0.99

5463

0.91

5464

0.90

6819

0.89

5835

0.79

5753

0.62

5462

0.56

5752

0.55

5751

0.55

4901

0.52

0.52

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1226.47
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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