Structure

    redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p)--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
289.97 4.0

Annotations:

B b1D-Gal,p/#bcleavage--3a2D-NeuAc,p$MONO,Und,-H,0,redEnd
290.36 0.9
306.15 0.4
347.17 0.3
364.18 1.1

Annotations:

B ?1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
383.8 0.3

Annotations:

YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
389.07 4.1

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
390.08 0.3
406.06 0.4
407.16 1.4

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
407.4 0.5
407.74 0.3
408.26 0.4
433.94 0.5
435.02 0.4
474.11 0.3
509.16 0.9
513.31 0.4
527.23 2.1

Annotations:

^{2,4}X_{GalNAc} redEnd--??1D-GalNAc,p/#xcleavage_2_4--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
527.87 0.3
528.32 0.5
550.83 0.4

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6b1D-GlcNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
569.21 27.4

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6b1D-GlcNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
570.16 5.4
587.34 8.0

Annotations:

YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
588.18 5.5
589.44 0.3
595.15 0.2
610.98 0.5
674.22 0.4
675.42 0.9

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
676.12 0.3
689.3 1.4

Annotations:

^{2,4}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_2_4)--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
697.71 0.3
707.07 1.3
707.56 0.8
713.14 0.4
714.24 0.3
716.35 0.6
716.87 0.3
725.38 0.3
745.19 1.0
746.36 0.6
749.23 39.3

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
750.0 4.5
750.42 5.1
759.47 0.3
782.72 0.4
791.18 1.1
802.92 0.4
816.17 0.6
818.98 0.3
819.54 0.6
820.63 0.3
824.23 0.3
824.57 0.2
834.97 0.7
842.33 0.6
852.49 0.4
866.01 0.3
867.54 0.6
868.24 0.5
878.21 0.9

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p)--6b1D-GlcNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
879.02 0.4
887.58 0.3
889.88 0.2
895.45 0.7
905.05 0.3
911.75 0.4
919.22 0.4
920.19 0.5
930.92 0.2
936.33 0.3
943.67 0.3
959.39 0.4
959.58 0.3
962.31 7.4
963.24 3.5
964.43 0.4
979.49 0.4
980.31 5.5
981.24 1.8
981.55 0.9
987.43 0.5
995.56 0.5
996.3 0.7
997.28 0.5
998.32 0.3
1004.19 1.1
1004.41 0.5
1005.39 0.6
1040.88 0.6
1041.32 3.1
1194.52 0.3
1485.89 0.4
1551.77 0.5
1593.43 0.2
1730.45 0.4
1834.42 0.3
1958.82 0.4

There are 54 similar spectra:

Id Structure Score

1.00

5739

0.98

4248

0.98

5240

0.98

4085

0.98

8026

0.98

3510

0.98

5590

0.97

5448

0.97

0.97

6593

0.97

5210

0.96

4249

0.95

5241

0.95

0.95

8027

0.95

7228

0.94

5191

0.94

7229

0.94

5179

0.92

4212

0.92

3980

0.92

5740

0.92

3766

0.91

3138

0.89

0.89

5399

0.89

3511

0.88

0.88

6594

0.88

5184

0.85

5449

0.85

4250

0.83

5242

0.83

8028

0.83

7413

0.78

7442

0.78

7632

0.78

0.78

5400

0.78

5741

0.77

5186

0.77

5185

0.75

5212

0.71

5805

0.71

3981

0.68

5803

0.68

5804

0.66

3979

0.64

8025

0.62

4084

0.60

4213

0.57

3982

0.54

7958

0.53

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1039.39
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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