Structure

    redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p)--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd

Integrated O-glycomic and proteomic signatures of spontaneous and butyrate-stimulated colorectal cancer cell line differentiation

GlyTouCan Accession Number: Loading...

Peak Intensity
290.08 2775.0

Annotations:

B b1D-Gal,p/#bcleavage--3a2D-NeuAc,p$MONO,Und,-H,0,redEnd
364.06 467.0

Annotations:

B a1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
389.16 2349.0

Annotations:

ZZ redEnd--?a1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
407.1 320.0

Annotations:

YZ redEnd--?a1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--?a1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
569.23 16876.0

Annotations:

YZ redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6b1D-GlcNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd Z redEnd--?a1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
587.2 4754.0

Annotations:

YY redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd Y redEnd--?a1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
731.28 1001.0

Annotations:

Z redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
749.24 33488.0

Annotations:

Y redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
819.27 1034.0

Annotations:

^{0,2}X_{NeuAc} redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#xcleavage_0_2)--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
878.19 244.0

Annotations:

Y redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p)--6b1D-GlcNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd

There are 54 similar spectra:

Id Structure Score

7229

0.98

0.95

5739

0.95

3766

0.95

3510

0.95

0.94

4877

0.94

4085

0.93

5448

0.93

8026

0.93

0.93

6593

0.93

5210

0.92

4248

0.92

5240

0.92

0.91

5399

0.91

5191

0.91

0.90

5590

0.90

8028

0.89

4212

0.88

5184

0.88

4250

0.88

5242

0.88

5179

0.87

7632

0.87

4249

0.86

5241

0.86

8027

0.86

0.85

5740

0.85

5741

0.85

5186

0.84

5212

0.82

3980

0.82

7413

0.80

7442

0.80

5804

0.79

3138

0.79

0.78

6594

0.78

3511

0.78

5449

0.76

5805

0.75

5185

0.71

5803

0.69

4213

0.63

0.57

5400

0.57

8025

0.57

3979

0.57

4084

0.56

3981

0.54

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1039.39
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

N/A

HPLC

Column Hypercarb

Method

  • 73min gradient with 0,6ul/min run rate
  • 10mM ammonium bicarbonate
  • 60% ACN, 10mM ammonium bicarbonate

Mass Spec

Bruker Daltonik amaZon Speed ETD ETD

MIRAGE Structural data

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