MIRAGE upload

redEnd--??1D-GalNAc,o(--3b1D-Gal,p--3a2D-NeuAc,p)--6b1D-GlcNAc,p--4b1D-Gal,p$MONO,Und,-H,0,redEnd

Colorectal cancer cell lines show striking isomeric diversity of their O-glycome

GlyTouCan Accession Number: Loading...

Peak	Intensity
290.125	23409.0
320.941	1814.0
347.172	1733.0
349.161	1537.0
364.138	1440.0
365.136	5218.0
366.121	3354.0
389.192	23753.0
404.174	2483.0
407.188	12705.0
416.094	1631.0
424.166	2841.0
443.166	1303.0
467.319	2391.0
509.218	4623.0
521.222	1782.0
527.012	2274.0
527.219	16299.0
527.381	1734.0
545.308	3706.0
551.243	2424.0
569.242	158012.0
569.706	2236.0
583.123	1918.0
587.249	68002.0
647.061	8082.0
658.197	1611.0
689.276	15879.0
695.982	1642.0
707.054	1834.0
707.3	9986.0
716.366	4474.0
727.22	1521.0
731.299	5852.0
732.188	1337.0
745.298	12210.0
749.286	216082.0
749.57	2472.0
749.789	1272.0
751.222	3570.0
791.265	2554.0
794.909	1497.0
800.314	1702.0
819.351	3356.0
832.16	2539.0
842.296	6437.0
847.439	1259.0
872.281	2208.0
874.188	307.0
885.283	1730.0
888.033	1336.0
902.407	1693.0
921.375	1815.0
932.35	1566.0
936.421	1375.0
962.358	82742.0
965.127	1338.0
973.002	1691.0
980.335	43388.0
987.648	4266.0
996.389	3809.0
1003.655	3544.0
1013.452	4875.0
1019.058	1305.0
1019.444	6208.0
1020.702	1308.0
1022.368	48100.0
1022.847	1323.0
1023.397	16114.0
1028.261	9120.0
1035.181	2767.0
1057.045	1862.0
1318.97	1670.0
1367.815	1600.0
1428.266	1559.0
1432.816	1498.0
1434.358	2640.0
1520.439	1667.0
1749.383	4905.0
1752.214	1681.0
1754.324	11428.0
1754.908	1398.0
1758.221	1423.0

There are 54 similar spectra:

Id	Structure	Score
5179		0.97
		0.96
6593		0.96
3510		0.96
4085		0.95
4248		0.95
5240		0.95
5739		0.95
5590		0.94
4249		0.94
5241		0.94
		0.94
4877		0.94
		0.94
8027		0.94
5448		0.93
8026		0.93
4212		0.93
3511		0.92
3980		0.92
3138		0.92
7229		0.92
		0.91
6594		0.91
7228		0.91
3766		0.90
5804		0.90
5210		0.89
5449		0.89
		0.87
		0.87
5185		0.86
5184		0.86
		0.85
		0.85
5740		0.84
5186		0.83
8028		0.80
4250		0.79
5242		0.79
7413		0.78
7442		0.78
3981		0.77
5741		0.76
7632		0.72
5805		0.71
5212		0.70
5803		0.67
3979		0.64
8025		0.63
4084		0.58
3982		0.58
7958		0.54
4213		0.53

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1039.39
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Homo Sapiens

Tissue - Cell Line

HPLC

Column Hypercarb

Method

73 min gradient with 0,6ul/min run rate
10mM ammonium bicarbonate
60% ACN, 10mM ammonium bicarbonate

Mass Spec

Bruker Daltonik amaZon Speed ETD ETD

MIRAGE Structural data

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