Structure

    redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd

An E-workflow for implementing guidelines in glycomics mass spectrometry

GlyTouCan Accession Number: Loading...

Peak Intensity
166.22 0.4
179.13 0.4

Annotations:

C ?1D-GalNAc,p/#ccleavage--3b1D-Gal,p$MONO,Und,-H,0,redEnd
181.99 0.3
184.15 0.3
185.76 0.2

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
186.3 0.2

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
191.88 0.2
192.23 0.8
199.98 0.4
202.03 11.3

Annotations:

B ?1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd
203.03 0.6
204.07 15.4

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
205.23 1.0
209.16 0.3
219.26 0.3
220.06 5.5

Annotations:

C ?1D-GalNAc,p/#ccleavage--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd
233.68 0.4
234.18 0.9
243.06 0.7
257.14 0.2
258.68 0.3
262.45 1.1

Annotations:

^{0,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_0_4--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd ^{1,3}A_{GalNAc} ?1D-GalNAc,p/#acleavage_1_3--3b1D-Gal,p$MONO,Und,-H,0,redEnd ^{2,5}X_{Gal}Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_2_5)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
263.09 1.5
264.02 0.9

Annotations:

^{0,2}X_{Gal}Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_0_2)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
264.33 0.5

Annotations:

^{0,2}X_{Gal}Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_0_2)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
270.25 1.2
273.06 0.2
275.38 0.5
276.2 4.5

Annotations:

^{0,3}X_{Gal}Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_0_3)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ^{1,4}X_{Gal}Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_1_4)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ^{3,5}A_{GalNAc} ?1D-GalNAc,p/#acleavage_3_5--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd Z^{1,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p/#xcleavage_1_4$MONO,Und,-H,0,redEnd
281.06 0.5
281.25 0.4
287.13 0.2

Annotations:

Z^{0,2}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
290.82 0.5
291.94 0.8

Annotations:

^{3,5}X_{Gal}Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_3_5)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ^{0,3}A_{GalNAc} ?1D-GalNAc,p/#acleavage_0_3--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd ^{1,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_1_4--3b1D-Gal,p$MONO,Und,-H,0,redEnd
299.12 0.2
301.77 0.2
304.91 0.4

Annotations:

Y^{0,2}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
306.13 1.2

Annotations:

^{0,4}X_{Gal}Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_0_4)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ^{1,3}X_{Gal}Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_1_3)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal}Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_2_4)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd Z^{1,3}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p/#xcleavage_1_3$MONO,Und,-H,0,redEnd
311.34 0.9
312.07 0.7
316.68 0.5

Annotations:

Z^{0,3}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p/#xcleavage_0_3$MONO,Und,-H,0,redEnd
317.24 0.2

Annotations:

Z^{0,3}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p/#xcleavage_0_3$MONO,Und,-H,0,redEnd
318.14 0.7
323.87 1.3

Annotations:

^{0,4}X_{Gal}Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_0_4)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd ^{1,3}X_{Gal}Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_1_3)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal}Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_2_4)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd Y^{1,3}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p/#xcleavage_1_3$MONO,Und,-H,0,redEnd
328.99 0.9
329.35 1.2
346.71 0.5

Annotations:

Z^{0,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd Z^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
347.15 7.5

Annotations:

Z^{0,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd Z^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
348.19 3.1
353.33 0.2
359.23 0.7
360.22 0.3
365.2 10.7

Annotations:

Y^{0,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd Y^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
365.59 0.6

Annotations:

Y^{0,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd Y^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
366.12 27.8

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
367.19 0.4
371.01 2.2
377.02 0.9
377.27 0.2
379.27 0.4
384.59 0.8

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
384.91 0.4
385.85 0.7
389.09 5.6
389.33 2.3
390.23 1.1
407.14 712.6

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd
408.16 81.0
418.26 0.3
419.89 0.3
425.14 22.6

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd
425.4 6.5

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd
426.11 2.7
432.26 0.4
436.05 0.5
450.25 1.1
453.73 0.3
467.16 0.7

Annotations:

^{0,2}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd ^{0,2}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_0_2)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd
479.8 0.5
482.87 0.3

Annotations:

^{2,5}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p/#xcleavage_2_5$MONO,Und,-H,0,redEnd ^{2,5}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_2_5)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd
486.08 0.8

Annotations:

^{1,3}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p/#xcleavage_1_3$MONO,Und,-H,0,redEnd
487.86 0.9
495.26 0.4
498.75 0.3
500.91 0.5
513.89 0.4
527.31 13.6

Annotations:

^{0,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd ^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd ^{0,4}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_0_4)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd ^{1,3}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_1_3)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_2_4)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd
527.98 2.4
528.37 3.0
529.71 0.2
533.5 0.2
540.37 0.2
542.4 0.2
545.17 1.8
550.64 1.4
551.85 0.4
555.19 0.4
559.33 0.3
564.29 0.9
567.37 0.2

There are 39 similar spectra:

Id Structure Score

5546

1.00

3868

1.00

7976

1.00

5415

0.99

7138

0.99

4259

0.99

0.99

6699

0.99

5693

0.99

5934

0.99

6795

0.99

7728

0.99

0.99

4833

0.99

0.99

5387

0.99

3998

0.99

4077

0.99

7163

0.97

5548

0.95

5507

0.93

5416

0.89

6700

0.85

7876

0.83

0.83

4800

0.83

0.79

7680

0.79

7687

0.79

5694

0.70

5935

0.69

6701

0.63

4231

0.62

5223

0.62

3743

0.61

6796

0.58

4229

0.57

5221

0.57

7948

0.56

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 586.24
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Bos Taurus
Tissue - Cervix Mucus

HPLC

Column NA

Method

  • 78 min gradient with Approx 3-5 ul/min (static split from 250 ul/min) run rate
  • 10 mM (NH4)HCO3
  • 10 mM (NH4)HCO3 in 80% acetonitrile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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