Structure

    redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p$MONO,Und,-H,0,redEnd

An E-workflow for implementing guidelines in glycomics mass spectrometry

GlyTouCan Accession Number: Loading...

Peak Intensity
209.99 1.9
222.21 2.5

Annotations:

Y redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
235.15 1.5

Annotations:

^{3,5}A_{GlcNAc}Y b1D-GlcNAc,p/#acleavage_3_5--4b1D-Gal,p--3a1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
235.35 2.2

Annotations:

^{3,5}A_{GlcNAc}Y b1D-GlcNAc,p/#acleavage_3_5--4b1D-Gal,p--3a1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
261.82 1.2

Annotations:

^{2,4}A_{GalNAc}Y ?1D-GalNAc,p/#acleavage_2_4--3b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd C^{0,2}X_{Gal} ?1D-GalNAc,p/#ccleavage--3b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
263.18 1.6

Annotations:

^{0,2}A_{GlcNAc}Z b1D-GlcNAc,p/#acleavage_0_2--4b1D-Gal,p--3a1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd B^{0,4}X_{Gal} b1D-GlcNAc,p/#bcleavage--4b1D-Gal,p--3a1D-Gal,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd B^{1,3}X_{Gal} b1D-GlcNAc,p/#bcleavage--4b1D-Gal,p--3a1D-Gal,p/#xcleavage_1_3$MONO,Und,-H,0,redEnd B^{2,4}X_{Gal} b1D-GlcNAc,p/#bcleavage--4b1D-Gal,p--3a1D-Gal,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
264.47 0.9
274.05 1.6

Annotations:

B^{1,4}X_{Gal} ?1D-GalNAc,p/#bcleavage--3b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_1_4$MONO,Und,-H,0,redEnd ^{1,4}A_{GlcNAc}Z b1D-GlcNAc,p/#acleavage_1_4--4b1D-Gal,p--3a1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
305.26 1.8

Annotations:

^{0,2}X_{GlcNAc} redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
341.01 1.4

Annotations:

C b1D-GlcNAc,p/#ccleavage--4b1D-Gal,p--3a1D-Gal,p$MONO,Und,-H,0,redEnd
347.11 8.8
347.55 2.8
348.01 2.9
363.9 1.6

Annotations:

BY ?1D-GalNAc,p/#bcleavage--3b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--3b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
365.25 16.8

Annotations:

^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
366.15 2.7
367.1 1.6
383.08 6.4

Annotations:

^{2,4}A_{GlcNAc} b1D-GlcNAc,p/#acleavage_2_4--4b1D-Gal,p--3a1D-Gal,p$MONO,Und,-H,0,redEnd
389.06 12.5
390.16 6.9
390.4 2.1
396.96 1.6

Annotations:

^{3,5}A_{GlcNAc} b1D-GlcNAc,p/#acleavage_3_5--4b1D-Gal,p--3a1D-Gal,p$MONO,Und,-H,0,redEnd
407.37 9.5

Annotations:

Z redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
407.78 1.5
408.31 3.0
424.11 4.6

Annotations:

^{2,4}A_{GalNAc}Y ?1D-GalNAc,p/#acleavage_2_4--3b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd C^{0,2}X_{Gal} ?1D-GalNAc,p/#ccleavage--3b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
425.16 20.9

Annotations:

Y redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
426.27 1.4
426.56 3.3
443.89 1.7
462.13 2.3
479.24 1.2
485.12 2.6
490.88 1.7
509.19 3.4
509.49 3.6
520.34 2.0
521.11 5.0

Annotations:

^{1,5}A_{GalNAc}Z ?1D-GalNAc,p/#acleavage_1_5--3b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
526.17 9.7

Annotations:

B ?1D-GalNAc,p/#bcleavage--3b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p$MONO,Und,-H,0,redEnd
527.19 12.5

Annotations:

^{1,3}X_{Gal} redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_1_3$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal} redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
528.35 2.5
545.28 2.5
551.06 0.6
568.56 5.8
569.2 216.3

Annotations:

Z redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
570.23 27.6
586.34 2.7

Annotations:

^{2,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_2_4--3b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p$MONO,Und,-H,0,redEnd
586.71 1.0
587.14 14.3

Annotations:

Y redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
587.52 3.2

Annotations:

Y redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
588.17 7.9
588.94 1.4
619.99 4.0
629.0 5.1

Annotations:

^{0,2}X_{Gal} redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
643.17 1.1
647.34 12.3
648.2 1.7
689.21 136.3

Annotations:

^{0,4}X_{Gal} redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd ^{1,3}X_{Gal} redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#xcleavage_1_3$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal} redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
690.17 31.0
696.12 1.3
704.12 2.1
706.76 2.4
707.26 44.7
707.92 8.3
708.18 4.1
715.35 1.6

There are 45 similar spectra:

Id Structure Score

0.97

7239

0.88

5560

0.86

3973

0.86

3496

0.86

7624

0.86

5711

0.86

3118

0.85

5778

0.85

4805

0.85

0.85

5178

0.85

4081

0.85

0.85

0.85

7650

0.85

7666

0.85

7991

0.85

7169

0.85

7732

0.84

0.84

5390

0.84

5561

0.84

0.84

4237

0.84

5229

0.84

5200

0.83

0.83

4849

0.83

4206

0.82

3754

0.82

5428

0.82

3877

0.81

4238

0.80

5230

0.80

7404

0.73

7433

0.73

7884

0.73

7992

0.73

7625

0.70

7953

0.68

5516

0.65

5712

0.61

6719

0.57

3878

0.57

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 748.29
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Bos Taurus
Tissue - Cervix Mucus

HPLC

Column NA

Method

  • 78 min gradient with Approx 3-5 ul/min (static split from 250 ul/min) run rate
  • 10 mM (NH4)HCO3
  • 10 mM (NH4)HCO3 in 80% acetonitrile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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