Structure

    redEnd--??1D-GalNAc,p(--??1D-Gal,p--??2D-NeuAc,p)--??2D-NeuAc,p$MONO,Und,-H,0,redEnd

Rainbow trout mucus O-glycosylation

GlyTouCan Accession Number: Loading...

Peak Intensity
288.0 0.3
290.13 20.7

Annotations:

B ?1D-Gal,p/#bcleavage--??2D-NeuAc,p$MONO,Und,-H,0,redEnd B ?1D-GalNAc,p/#bcleavage--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
290.99 0.7

Annotations:

B ?1D-Gal,p/#bcleavage--??2D-NeuAc,p$MONO,Und,-H,0,redEnd B ?1D-GalNAc,p/#bcleavage--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
308.1 1.5

Annotations:

C ?1D-Gal,p/#ccleavage--??2D-NeuAc,p$MONO,Und,-H,0,redEnd C ?1D-GalNAc,p/#ccleavage--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
308.48 0.2

Annotations:

C ?1D-Gal,p/#ccleavage--??2D-NeuAc,p$MONO,Und,-H,0,redEnd C ?1D-GalNAc,p/#ccleavage--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
308.83 0.8

Annotations:

C ?1D-Gal,p/#ccleavage--??2D-NeuAc,p$MONO,Und,-H,0,redEnd C ?1D-GalNAc,p/#ccleavage--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
309.25 0.3
369.2 1.1
383.94 0.7

Annotations:

YY redEnd--??1D-GalNAc,p(--??1D-Gal,p--??2D-NeuAc,p/#ycleavage)--??2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
384.29 1.4

Annotations:

YY redEnd--??1D-GalNAc,p(--??1D-Gal,p--??2D-NeuAc,p/#ycleavage)--??2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
385.22 0.8
433.25 0.8
454.45 1.9
469.09 0.2
469.44 0.3

Annotations:

C ?1D-GalNAc,p/#ccleavage--??1D-Gal,p--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
477.4 0.2
492.69 0.3
493.55 1.8
494.54 0.6

Annotations:

Z redEnd--??1D-GalNAc,p(--??1D-Gal,p/#zcleavage)--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
495.37 1.7

Annotations:

Z redEnd--??1D-GalNAc,p(--??1D-Gal,p/#zcleavage)--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
497.3 1.0
509.42 0.6
510.47 1.2
511.31 0.8
513.17 2.8

Annotations:

Y redEnd--??1D-GalNAc,p(--??1D-Gal,p/#ycleavage)--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
513.59 1.0

Annotations:

Y redEnd--??1D-GalNAc,p(--??1D-Gal,p/#ycleavage)--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
514.37 2.4
514.71 1.1
515.38 1.4
516.12 0.5
520.23 0.6
533.79 0.2
537.99 0.6
567.22 0.2
577.47 0.5
579.26 0.9
580.06 1.8
581.08 0.7
581.66 0.3
592.4 0.4
595.28 0.2
597.45 4.6
598.28 1.2
614.49 0.3
615.38 9.7
616.23 0.2
631.47 0.5
638.22 0.6
640.29 0.3
653.23 0.5
655.14 0.8
655.37 0.8
656.45 4.1

Annotations:

Z redEnd--??1D-GalNAc,p(--??1D-Gal,p--??2D-NeuAc,p)--??2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--??1D-Gal,p--??2D-NeuAc,p/#zcleavage)--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
657.37 88.2

Annotations:

Z redEnd--??1D-GalNAc,p(--??1D-Gal,p--??2D-NeuAc,p)--??2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--??1D-Gal,p--??2D-NeuAc,p/#zcleavage)--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
658.39 1.3
659.2 0.4
660.49 0.2
673.39 31.8
673.74 4.5
674.36 50.4

Annotations:

Y redEnd--??1D-GalNAc,p(--??1D-Gal,p--??2D-NeuAc,p)--??2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p(--??1D-Gal,p--??2D-NeuAc,p/#ycleavage)--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
675.38 4255.7

Annotations:

Y redEnd--??1D-GalNAc,p(--??1D-Gal,p--??2D-NeuAc,p)--??2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p(--??1D-Gal,p--??2D-NeuAc,p/#ycleavage)--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
676.37 74.8
677.45 13.4
709.32 0.8
716.53 0.4
727.02 0.7
738.2 0.9
773.3 0.9
776.5 0.3
801.5 0.2
809.0 0.6
813.46 0.7
828.05 0.5
828.36 0.4
856.22 0.6
869.65 0.4
870.46 0.4
886.29 0.2
888.61 0.7
889.2 0.4
889.8 0.7
903.71 0.9
904.3 1.2
904.8 0.3
905.33 0.4
906.12 2.5
906.51 1.8
906.87 0.5
912.7 0.3
920.96 0.8
921.16 0.2
921.68 2.2
922.54 63.7
923.42 1.1
923.73 1.4
930.17 2.5
930.77 3.0
934.93 1.7
936.14 0.6
1406.86 0.4

There are 36 similar spectra:

Id Structure Score

6592

1.00

1.00

7175

1.00

5443

1.00

5586

1.00

5796

1.00

7394

1.00

7423

1.00

3505

1.00

7151

1.00

7629

1.00

4208

1.00

5521

1.00

4083

1.00

5735

1.00

4812

1.00

1.00

6814

1.00

4245

1.00

5237

1.00

7238

1.00

5177

1.00

5183

1.00

3763

1.00

8015

1.00

7684

0.98

7691

0.98

0.98

7696

0.98

0.98

6813

0.97

3977

0.97

7628

0.96

8013

0.94

8014

0.93

7153

0.58

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 965.35
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

N/A

HPLC

Column

Method

  • 78 min gradient with approx 3-5 ul/min (static split from 250 ul/min) run rate
  • 10 mM (NH4)HCO3
  • 10 mM (NH4)HCO3 in 80% acetonitrile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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