Structure

    redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
202.09 1.3

Annotations:

B ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p$MONO,Und,-H,0,redEnd
203.94 7.4

Annotations:

YZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#ycleavage)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#zcleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
204.16 4.3
208.03 1.0
210.23 0.7
211.88 1.0
212.08 0.6
220.0 3.5

Annotations:

C ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p$MONO,Und,-H,0,redEnd
230.12 0.9
230.98 0.7
236.12 0.6
245.06 0.6
250.04 0.5
254.03 0.4
268.91 0.6
272.25 1.8
275.12 0.7
276.15 3.1
288.07 0.6
290.03 676.8

Annotations:

B ?1D-GalNAc,p/#bcleavage--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
291.05 6.4
291.4 0.7
306.12 0.8
308.05 29.2

Annotations:

C ?1D-GalNAc,p/#ccleavage--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
309.05 0.5
309.86 0.7
310.33 0.5
316.16 0.5
317.12 0.5
339.0 1.0
342.01 0.4
343.01 0.8
346.26 0.7
347.17 1.9
365.23 5.3
371.15 0.5
371.99 0.5
376.95 0.4
387.31 0.4
389.15 0.7
391.17 2.1
399.92 0.9
405.14 6.7
407.13 31.6

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
409.4 0.9
411.33 0.5
415.26 0.5
416.99 1.0
417.28 0.7
417.88 0.4
418.09 0.5
425.14 96.7

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
426.13 0.6
426.97 0.7
427.18 0.5
429.23 3.2
431.2 1.0
433.18 2.5
434.99 1.3
435.29 0.5
446.97 1.1
447.4 0.5
449.18 0.4
451.17 14.1
459.06 2.0
459.35 0.8
465.03 0.8
467.19 7.0
469.09 1.4
477.12 41.1
493.02 0.6
495.03 10.9

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd ^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
495.29 8.8
500.19 0.5
513.18 2.2

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
514.26 0.6
515.21 0.9
515.64 0.6
518.26 1.8
531.07 0.5
558.17 0.9
578.2 2.0
578.54 0.9
590.24 0.5
595.89 0.6
596.27 0.5
608.1 2.4
611.94 0.5
612.28 0.7
620.35 0.6
638.13 55.3
639.25 1.3
654.26 0.5
655.48 0.9
656.21 131.9
657.17 2.0
662.29 0.5
670.1 0.5
680.23 16.5
681.38 0.5

There are 18 similar spectra:

Id Structure Score

5424

1.00

5705

1.00

5773

1.00

6800

0.99

6713

0.99

7422

0.99

7393

0.99

7144

0.99

7182

0.98

5772

0.98

5553

0.98

5704

0.97

3750

0.97

4845

0.96

7166

0.96

6712

0.95

5512

0.95

5513

0.90

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 715.28
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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