Structure

    redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
203.96 3.7

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p/#ycleavage)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p/#zcleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
204.54 0.0
205.11 0.0
215.13 1.1
215.69 0.0
216.21 0.0
229.96 5.1
230.52 0.0
231.05 0.0
262.25 1.0

Annotations:

^{2,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_2_4--3b1D-GlcNAc,p$MONO,Und,-H,0,redEnd
262.8 0.0
263.36 0.0
272.04 5.8
272.25 1.9
272.85 0.0
273.37 0.0
274.2 0.8

Annotations:

Z^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p/#zcleavage)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
274.77 0.0
275.29 0.0
290.18 304.8

Annotations:

B ?1D-GalNAc,p/#bcleavage--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
291.11 11.1
291.37 6.3
291.95 0.0
292.52 0.0
308.08 11.7

Annotations:

C ?1D-GalNAc,p/#ccleavage--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
308.7 0.0
309.23 0.0
323.03 1.7
323.6 0.0
324.12 0.0
357.29 1.4
357.86 0.0
358.38 0.0
381.21 0.5
381.78 0.0
407.04 1.9

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
407.24 1.1
407.8 0.0
408.36 0.0
425.15 5.8

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
425.45 5.4
426.03 0.0
426.4 2.3
426.95 0.0
427.52 0.0
435.26 3.3
435.8 0.0
436.36 0.0
451.31 1.7
451.86 0.0
452.41 0.0
453.37 3.1

Annotations:

^{2,4}X_{GalNAc} redEnd--??1D-GalNAc,p/#xcleavage_2_4--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
453.94 0.0
454.46 0.0
459.21 0.6
459.78 0.0
477.41 52.8
478.14 0.0
478.69 0.0
492.98 0.7
493.54 0.0
494.76 2.7
495.33 34.3

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd ^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
496.04 0.0
496.61 0.0
513.37 8.5

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
513.99 0.0
514.53 0.0
518.29 1.9
518.86 0.0
519.38 0.0
548.41 4.6
548.96 0.0
549.52 0.0
578.09 1.7
578.63 0.0
579.19 0.0
602.56 2.4
603.11 0.0
603.64 0.0
607.88 3.8
608.49 5.5
609.19 0.0
609.71 0.0
638.17 6.1
638.53 2.3
639.09 0.0
639.61 0.0
654.26 5.7
654.8 0.0
655.36 0.0
656.41 32.7
657.12 0.0
657.68 0.0
672.4 2.0
672.95 0.0
673.49 0.0
680.2 2.1
680.79 0.0
681.35 0.0

There are 27 similar spectra:

Id Structure Score

1.00

5772

0.99

5553

0.99

7144

0.97

6800

0.97

6713

0.97

6712

0.97

5705

0.97

5424

0.96

5512

0.96

5773

0.96

4803

0.96

0.96

7182

0.96

0.96

0.96

5704

0.96

0.95

0.95

7393

0.95

7422

0.95

3750

0.95

7166

0.95

7988

0.93

7987

0.91

5513

0.91

5554

0.89

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 715.28
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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