Structure

    redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
257.03 0.8
257.6 0.0
261.39 0.2
290.04 30.1

Annotations:

B ?1D-GalNAc,p/#bcleavage--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
291.12 5.2
291.82 0.0
306.2 0.3
308.14 0.8

Annotations:

C ?1D-GalNAc,p/#ccleavage--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
308.7 0.0
316.01 0.7
316.56 0.0
340.95 0.3
364.03 1.1

Annotations:

B ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
364.27 0.8
364.53 0.4
365.15 1.6
365.7 0.0
388.58 0.2
389.25 0.3

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p/#zcleavage)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
390.24 0.2
407.07 1.9

Annotations:

YZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p/#ycleavage)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p/#zcleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
428.96 0.2
451.56 0.9
452.12 0.0
466.26 0.5
467.19 0.3
477.01 0.8

Annotations:

Z^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p/#zcleavage)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
477.55 0.0
494.99 0.4

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd Y^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p/#ycleavage)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
496.24 0.5
513.23 0.5

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
519.05 0.3
526.75 0.3
527.23 0.3
528.18 0.3
569.16 5.4

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
569.95 0.2
587.15 8.5

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
587.41 3.1
588.16 4.1
588.94 0.0
620.38 0.3
630.22 0.5
637.95 0.5
639.25 1.6
640.11 0.5
649.97 0.8
650.53 0.0
656.02 0.2
656.86 0.4
657.51 1.3

Annotations:

^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
658.22 0.7
658.78 0.0
661.34 0.5
661.59 0.2
662.16 0.3
663.89 0.7
664.44 0.0
675.3 1.3
676.16 1.0
679.95 1.6
680.34 1.5
680.93 0.3
698.32 0.2

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
699.24 0.5
710.11 0.7
710.35 0.2
716.24 1.0

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
716.79 0.0
717.3 2.7
717.87 0.0
718.16 0.2
735.32 0.2
739.97 0.3
741.18 0.6
749.13 0.3
750.24 0.3
752.03 0.9
752.6 0.0
757.89 0.4
758.25 0.2
769.89 0.2
770.22 0.4
770.57 0.3
771.94 0.5
772.48 0.0
774.17 0.3
781.21 0.3
782.11 0.8
790.54 0.3
800.24 24.6
801.19 2.5
801.83 0.0
817.18 0.5
818.21 35.0
819.02 4.5
819.32 3.8
841.06 0.2
843.34 1.1
843.89 0.0

There are 30 similar spectra:

Id Structure Score

1.00

5722

0.97

5436

0.96

7409

0.95

7438

0.95

8001

0.93

5785

0.92

5721

0.90

5435

0.84

4858

0.84

0.84

6806

0.76

5520

0.75

7148

0.74

5570

0.69

8003

0.59

4240

0.59

5232

0.59

4241

0.56

5233

0.56

5437

0.55

5394

0.55

0.55

4239

0.54

5231

0.54

8002

0.52

4082

0.52

4860

0.51

0.51

6807

0.51

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 877.33
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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