Structure

    redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
290.17 65.5

Annotations:

B ?1D-GalNAc,p/#bcleavage--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
290.79 1.4
291.29 4.6
291.94 0.0
320.24 1.9
320.78 0.0
345.25 0.8
361.38 0.8
362.31 0.8
363.22 0.5
364.31 0.3

Annotations:

B ?1D-GalNAc,p/#bcleavage--3b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
365.51 0.7
382.13 1.4

Annotations:

C ?1D-GalNAc,p/#ccleavage--3b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
382.69 0.0
407.32 3.2

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p--??1D-Gal,p/#ycleavage)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p--??1D-Gal,p/#zcleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
407.82 0.0
418.08 0.6
429.29 1.9
429.86 0.0
430.36 2.1
430.94 0.0
435.28 0.9
437.25 1.0
452.17 1.8
452.72 0.0
453.26 3.1

Annotations:

^{2,4}X_{GalNAc} redEnd--??1D-GalNAc,p/#xcleavage_2_4--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
453.84 0.0
458.89 0.3
459.22 0.3
477.34 3.7

Annotations:

Z^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p--??1D-Gal,p/#zcleavage)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
477.92 0.0
493.18 1.2
493.92 0.9
495.24 5.5

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd Y^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p--??1D-Gal,p/#ycleavage)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
495.86 0.0
496.48 1.6
497.03 0.0

Annotations:

Y^{1,5}X_{NeuAc} redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p--??1D-Gal,p/#ycleavage)--6a2D-NeuAc,p/#xcleavage_1_5$MONO,Und,-H,0,redEnd
513.31 4.2

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
527.53 1.0

Annotations:

^{0,4}X_{GalNAc} redEnd--??1D-GalNAc,p/#xcleavage_0_4--3b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
529.34 0.8
542.94 0.5
545.55 1.9
546.11 0.0
569.24 3.8

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p--??1D-Gal,p)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
569.58 1.8
570.13 0.0
586.97 1.5
587.5 6.6

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p--??1D-Gal,p)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
588.06 0.0
588.51 0.4
620.59 1.9
621.14 0.0
629.5 0.5
631.38 2.2
631.94 0.0
638.3 2.2
638.98 0.8
639.47 7.0
640.19 0.0
657.37 19.6

Annotations:

^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p--??1D-Gal,p)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
657.79 5.8
658.13 2.5
658.49 4.4
659.05 0.0
680.48 3.4
681.03 0.0
698.25 1.1

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p--??1D-Gal,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
698.53 0.6
699.15 0.5
710.56 3.1
711.12 0.0
716.32 2.4

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p--??1D-Gal,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
716.89 0.0
717.63 3.0
718.41 2.7
719.03 0.0
758.54 0.3
770.33 2.1
770.88 0.0
787.64 1.4
788.19 0.0
800.54 23.9
801.24 1.3
801.62 1.5
802.19 0.0
817.41 2.1
818.54 50.1
819.67 3.9
820.26 0.0
836.57 1.4
837.12 0.0
841.99 0.5
842.37 1.9
842.94 0.0
843.44 1.7
844.01 0.0
850.72 1.4
851.28 0.0
1390.86 1.2
1391.43 0.0

There are 33 similar spectra:

Id Structure Score

1.00

5785

0.95

7149

0.88

3880

0.86

6806

0.82

5570

0.81

4858

0.80

0.80

7409

0.73

7438

0.73

4241

0.72

5233

0.72

4240

0.71

5232

0.71

7148

0.70

6807

0.69

4082

0.68

7408

0.68

7437

0.68

8003

0.67

4860

0.66

0.66

5520

0.66

4239

0.65

5231

0.65

6734

0.64

5571

0.62

5786

0.61

3500

0.60

5437

0.59

8001

0.53

5721

0.53

8002

0.51

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 877.33
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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